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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17531399_17537737_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17531399 - 17537737

Intron Length:

6339

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

CCTGTTATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTAAT

U12 Branch Point Sequence:

CTCCTGTTATTT

Flanking Amino Acid:

VQQFVNDQGKWLLVGSPWSG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

74.5

41.9

Major BPS

73.1

0.57

71.9

31.3

Major PPT

0.59

0.8

73.7

35.5

Minor 5ss

41.2

-1

2.9

54.6

44.5

Minor BPS

43.9

-0.3

2.2

59.89

44.5

Associated Gene:

Gene:

ITGA2

Ensembl Gene ID:

ENSAPLG00000020611

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028658

17513969 - 17576341

62373

ENSAPLT00000039612

17513969 - 17576341

62373

ENSAPLT00000035891

17513969 - 17576341

62373