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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17544020_17544578_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17544020 - 17544578

Intron Length:

559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCTTAAA

5'SS Class:

major

3'SS Sequence:

CTTCATTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TATTTCTTCATT

Flanking Amino Acid:

PSSLGDFGSEVGLIQYANDP

Intron Amino Acid Position:

237

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

72.3

34.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

81.4

0.71

0.8

76.8

31.5

Minor 5ss

28.6

-2.5

2.7

33.4

41.7

Minor BPS

68.1

0.65

1.7

84.43

36.6

Associated Gene:

Gene:

ITGA2

Ensembl Gene ID:

ENSAPLG00000020611

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039612

17513969 - 17576341

62373