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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17549309_17551193_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17549309 - 17551193

Intron Length:

1885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGACGC

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTCCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTAAA

U12 Branch Point Sequence:

TAAATGTTGACT

Flanking Amino Acid:

LQDRNHSSYLGYSVAVLSTQ

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

69.9

41.1

Major BPS

77.5

0.68

0.8

76.2

24.6

Major PPT

84.4

0.77

0.7

77.3

31.5

Minor 5ss

32.3

-2

3.1

42.6

44.3

Minor BPS

0.01

2.1

69.03

41.7

Associated Gene:

Gene:

ITGA2

Ensembl Gene ID:

ENSAPLG00000020611

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039612

17513969 - 17576341

62373

ENSAPLT00000035891

17513969 - 17576341

62373

ENSAPLT00000028658

17513969 - 17576341

62373