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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17557236_17558453_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17557236 - 17558453

Intron Length:

1218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGAGTA

5'SS Class:

strong_major

3'SS Sequence:

ATTCTTTTTGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATTAT

U12 Branch Point Sequence:

GTACTATTATTC

Flanking Amino Acid:

FRPANRNNQVAIKYNATLDA

Intron Amino Acid Position:

618

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

75.2

35.1

Major BPS

72.4

0.56

1.1

63.7

42.3

Major PPT

85.2

0.79

0.7

81.3

29.9

Minor 5ss

33.6

-1.9

3.5

46.2

Minor BPS

45.9

-0.3

1.8

54.49

37.1

Associated Gene:

Gene:

ITGA2

Ensembl Gene ID:

ENSAPLG00000020611

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028658

17513969 - 17576341

62373

ENSAPLT00000039612

17513969 - 17576341

62373

ENSAPLT00000035891

17513969 - 17576341

62373