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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17559815_17560120_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17559815 - 17560120

Intron Length:

306

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

ATTTGTTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTATTATTA

Flanking Amino Acid:

IYSPTSVAYSIPFIKDCGED

Intron Amino Acid Position:

706

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.4

0.65

1.1

80.1

34.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.5

0.73

0.8

77.7

Minor 5ss

41.3

-1

2.8

52.2

44.4

Minor BPS

59.9

0.31

1.8

75.92

35.5

Associated Gene:

Gene:

ITGA2

Ensembl Gene ID:

ENSAPLG00000020611

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039612

17513969 - 17576341

62373

ENSAPLT00000035891

17513969 - 17576341

62373

ENSAPLT00000028658

17513969 - 17576341

62373