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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17561769_17563409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17561769 - 17563409

Intron Length:

1641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTATGTGGT

5'SS Class:

major

3'SS Sequence:

TTTTCCTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

CTTATATTAAGA

Flanking Amino Acid:

NLFFASSSLPSDGTEVSCQT

Intron Amino Acid Position:

781

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

69.2

41.7

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

0.9

0.6

85.3

Minor 5ss

-1

3.2

46.6

Minor BPS

49.7

-0

1.9

64.57

41.8

Associated Gene:

Gene:

ITGA2

Ensembl Gene ID:

ENSAPLG00000020611

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039612

17513969 - 17576341

62373

ENSAPLT00000035891

17513969 - 17576341

62373

ENSAPLT00000028658

17513969 - 17576341

62373