Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17657993_17660886_F

Intron Information:

Intron Rank:

144927

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

17657993 - 17660886

Intron Length:

2894

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGAGA

5'SS Class:

strong_major

3'SS Sequence:

GGAATGACTATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTAGTAA

U12 Branch Point Sequence:

TAAGCACAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

78.7

37.2

Major BPS

50.6

0.02

1.4

52.1

43.5

Major PPT

53.3

0.07

43.9

42.1

Minor 5ss

31.6

-2.1

3.1

45.7

Minor BPS

43.5

-0.4

2.2

64.22

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018451

17657962 - 17663663

5702