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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17660971_17663281_F

Intron Information:

Intron Rank:

144928

Intron Class:

major

Intron Phase:

Intron Coordinates:

17660971 - 17663281

Intron Length:

2311

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAATT

5'SS Class:

strong_major

3'SS Sequence:

CTATGTGTTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

AGTTTGCAAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

84.6

33.3

Major BPS

70.8

0.52

70.6

31.6

Major PPT

62.9

0.29

1.2

59.7

45.1

Minor 5ss

-1.4

3.4

57.1

47.2

Minor BPS

41.6

-0.5

2.4

41.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018451

17657962 - 17663663

5702