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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17729062_17731024_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17729062 - 17731024

Intron Length:

1963

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGACCG

5'SS Class:

major

3'SS Sequence:

TGTCCCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTGAAG

U12 Branch Point Sequence:

CCCCCCTTGTCC

Flanking Amino Acid:

CHFMEDHTAQAGNCWLRQAR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.3

0.67

44.9

Major BPS

41.8

-0.5

1.6

49.3

42.5

Major PPT

72.8

0.51

0.8

66.2

Minor 5ss

31.8

-2.1

32.8

41.4

Minor BPS

41.4

-0.7

3.4

54.63

44.1

Associated Gene:

Gene:

FST

Ensembl Gene ID:

ENSAPLG00000014294

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014905

17728979 - 17735165

6187