Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17865176_17898948_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

17865176 - 17898948

Intron Length:

33773

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAT|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTTCATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTCT

U12 Branch Point Sequence:

TTTCTCTTCATA

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

86.5

28.5

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

83.9

0.76

0.6

80.2

25.3

Minor 5ss

40.8

-1

2.8

57.5

39.6

Minor BPS

62.9

0.4

1.7

76.1

35.4

Associated Gene:

Gene:

ARL15

Ensembl Gene ID:

ENSAPLG00000004935

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024490

17865033 - 18047661

182629

ENSAPLT00000043907

17865033 - 18059255

194223

ENSAPLT00000040269

17865033 - 18089296

224264

ENSAPLT00000036839

17865033 - 18080145

215113