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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_17941370_18000177_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17941370 - 18000177

Intron Length:

58808

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CCTGTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAC

U12 Branch Point Sequence:

CTCTCCTGTCTT

Flanking Amino Acid:

DKPAARSVQEGEVFVLGCHY

Intron Amino Acid Position:

156

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

79.4

28.9

Major BPS

71.4

0.53

1.1

63.4

Major PPT

83.1

0.74

0.8

80.1

31.9

Minor 5ss

38.1

-1.3

3.1

48.5

47.7

Minor BPS

37.9

-0.8

3.6

64.04

46.5

Associated Gene:

Gene:

ARL15

Ensembl Gene ID:

ENSAPLG00000004935

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040269

17865033 - 18089296

224264

ENSAPLT00000036839

17865033 - 18080145

215113

ENSAPLT00000024490

17865033 - 18047661

182629

ENSAPLT00000043907

17865033 - 18059255

194223

ENSAPLT00000043025

17865033 - 18080145

215113