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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_18007192_18009909_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18007192 - 18009909

Intron Length:

2718

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGATGC

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CGCATTTTAATC

Flanking Amino Acid:

ESPENIVSTTGFSIKAVPFQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

66.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

85.9

0.81

0.7

84.8

Minor 5ss

36.9

-1.5

3.3

50.4

46.2

Minor BPS

53.3

0.08

1.3

54.46

38.4

Associated Gene:

Gene:

ARL15

Ensembl Gene ID:

ENSAPLG00000004935

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024490

17865033 - 18047661

182629

ENSAPLT00000043025

17865033 - 18080145

215113

ENSAPLT00000005092

17865023 - 18020524

155502

ENSAPLT00000040269

17865033 - 18089296

224264

ENSAPLT00000036839

17865033 - 18080145

215113

ENSAPLT00000045242

17864954 - 18077888

212935

ENSAPLT00000030240

17865023 - 18055787

190765

ENSAPLT00000043907

17865033 - 18059255

194223