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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1807336_1807805_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1807336 - 1807805

Intron Length:

470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTGAGGAAC

5'SS Class:

major

3'SS Sequence:

TTTTCCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CCTTTCTGATCA

Flanking Amino Acid:

LQLLSPELWWCDVTKFGRGD

Intron Amino Acid Position:

898

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.2

0.36

1.1

62.1

38.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

87.7

0.85

0.7

80.8

31.1

Minor 5ss

29.1

-2.4

3.1

34.7

41.5

Minor BPS

52.2

0.07

1.8

63.26

43.4

Associated Gene:

Gene:

UBAP2

Ensembl Gene ID:

ENSAPLG00000006449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016704

1699583 - 1812518

112936

ENSAPLT00000006718

1699583 - 1812518

112936

ENSAPLT00000040637

1699583 - 1812611

113029

ENSAPLT00000017199

1699583 - 1812518

112936