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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1808021_1808794_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1808021 - 1808794

Intron Length:

774

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTAAGTGTG

5'SS Class:

major

3'SS Sequence:

CTCCTTTGTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

CTTTTGTTATCC

Flanking Amino Acid:

SAFQYGPTMFVPPASAKQHG

Intron Amino Acid Position:

970

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

1.1

70.9

39.3

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

78.7

0.65

0.9

71.8

38.1

Minor 5ss

38.9

-1.3

3.4

55.1

43.4

Minor BPS

50.5

-0

2.3

69.18

42.9

Associated Gene:

Gene:

UBAP2

Ensembl Gene ID:

ENSAPLG00000006449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040637

1699583 - 1812611

113029

ENSAPLT00000017199

1699583 - 1812518

112936

ENSAPLT00000016704

1699583 - 1812518

112936

ENSAPLT00000006718

1699583 - 1812518

112936