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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1808895_1808977_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1808895 - 1808977

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGCTCG

5'SS Class:

major

3'SS Sequence:

TACACACCGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACACAC

U12 Branch Point Sequence:

TTGTCTTGTACA

Flanking Amino Acid:

SGYGQHGYGAGYDDLTQGTA

Intron Amino Acid Position:

930

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.4

43.7

Major BPS

0.25

66.9

29.8

Major PPT

57.8

0.18

51.6

37.8

Minor 5ss

43.1

-0.8

56.7

47.5

Minor BPS

57.7

0.24

1.8

71.77

40.2

Associated Gene:

Gene:

UBAP2

Ensembl Gene ID:

ENSAPLG00000006449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017199

1699583 - 1812518

112936

ENSAPLT00000016704

1699583 - 1812518

112936

ENSAPLT00000040637

1699583 - 1812611

113029