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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1808895_1810552_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1808895 - 1810552

Intron Length:

1658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGCTCG

5'SS Class:

major

3'SS Sequence:

TTTTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTGTCAGTACTT

Flanking Amino Acid:

SGYGQHGYGAGVSVTSSNTG

Intron Amino Acid Position:

1003

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.4

43.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

91.8

0.94

0.7

84.6

Minor 5ss

43.1

-0.8

56.7

47.5

Minor BPS

46.4

-0.1

2.4

72.52

44.9

Associated Gene:

Gene:

UBAP2

Ensembl Gene ID:

ENSAPLG00000006449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006718

1699583 - 1812518

112936