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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1810621_1811653_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1810621 - 1811653

Intron Length:

1033

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAAC

5'SS Class:

strong_major

3'SS Sequence:

GCCTCCCGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAC

U12 Branch Point Sequence:

AGCCTCTGACCC

Flanking Amino Acid:

ISGSVYNKTQTFDKQGFHAG

Intron Amino Acid Position:

1026

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

78.2

31.2

Major BPS

69.1

0.47

60.7

37.6

Major PPT

67.9

0.4

61.2

Minor 5ss

27.1

-2.6

42.4

Minor BPS

45.7

-0.3

1.7

51.51

39.2

Associated Gene:

Gene:

UBAP2

Ensembl Gene ID:

ENSAPLG00000006449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016704

1699583 - 1812518

112936

ENSAPLT00000006718

1699583 - 1812518

112936

ENSAPLT00000040637

1699583 - 1812611

113029