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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1811846_1812422_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1811846 - 1812422

Intron Length:

577

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGATTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CCTGTTTTGATT

Flanking Amino Acid:

LHHHLQQDGQGGSGQRNQPS

Intron Amino Acid Position:

1090

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

68.8

43.8

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

82.1

0.72

0.8

74.4

40.4

Minor 5ss

28.2

-2.5

2.7

32.3

42.2

Minor BPS

53.4

0.19

1.4

64.84

41.2

Associated Gene:

Gene:

UBAP2

Ensembl Gene ID:

ENSAPLG00000006449

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040637

1699583 - 1812611

113029

ENSAPLT00000016704

1699583 - 1812518

112936

ENSAPLT00000006718

1699583 - 1812518

112936