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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_18263799_18264641_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

18263799 - 18264641

Intron Length:

843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAAGA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTAAA

U12 Branch Point Sequence:

TGTACCTAAATC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

71.7

40.1

Major BPS

63.9

0.35

63.9

30.3

Major PPT

85.3

0.79

0.6

84.5

23.4

Minor 5ss

31.4

-2.1

3.1

40.2

45.5

Minor BPS

62.9

0.38

1.7

71.9

39.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004801

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034403

18238360 - 18264758

26399