Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_18362491_18366643_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18362491 - 18366643

Intron Length:

4153

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ATG|GCAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACATAT

U12 Branch Point Sequence:

TTTTTTGTACAT

Flanking Amino Acid:

PMLVNSLKLYGHKGRVLHIA

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.88

92.3

24.3

Major BPS

66.4

0.41

61.3

Major PPT

89.2

0.88

0.7

81.2

36.5

Minor 5ss

31.5

-2.1

48.3

41.8

Minor BPS

47.9

-0

2.3

75.95

41.3

Associated Gene:

Gene:

CDC20B

Ensembl Gene ID:

ENSAPLG00000020360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035672

18362251 - 18394077

31827

ENSAPLT00000024808

18362327 - 18374001

11675