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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_18368980_18371498_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18368980 - 18371498

Intron Length:

2519

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCATTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTTCTCATTT

Flanking Amino Acid:

ALSWNHYILSSGSRLGSIHH

Intron Amino Acid Position:

195

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.5

0.74

72.2

39.5

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.81

0.7

80.2

30.7

Minor 5ss

27.6

-2.6

3.4

40.1

Minor BPS

62.3

0.47

1.8

83.64

37.8

Associated Gene:

Gene:

CDC20B

Ensembl Gene ID:

ENSAPLG00000020360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035672

18362251 - 18394077

31827

ENSAPLT00000024808

18362327 - 18374001

11675