Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_18374049_18376707_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18374049 - 18376707

Intron Length:

2659

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTCC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCAAATACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

CATTATTGAACT

Flanking Amino Acid:

VCENSSCIWKGCQERTQNEF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

77.6

31.5

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

73.3

0.53

66.8

37.4

Minor 5ss

47.6

-0.2

2.4

62.3

42.5

Minor BPS

0.36

1.7

75.11

41.3

Associated Gene:

Gene:

CDC20B

Ensembl Gene ID:

ENSAPLG00000020360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035672

18362251 - 18394077

31827