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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_18381960_18394005_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

18381960 - 18394005

Intron Length:

12046

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

TCCACTTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACTGAC

U12 Branch Point Sequence:

GCTCCCTCCACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

75.8

33.8

Major BPS

55.9

0.15

1.2

Major PPT

73.3

0.52

68.2

37.3

Minor 5ss

29.5

-2.3

3.4

38.8

46.5

Minor BPS

50.7

0.1

70.65

45.7

Associated Gene:

Gene:

CDC20B

Ensembl Gene ID:

ENSAPLG00000020360

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035672

18362251 - 18394077

31827