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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_18432827_18433038_R


Intron Information:

Intron Rank:
13

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
18432827 - 18433038

Intron Length:
212

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTACATTCT

5'SS Class:
major

3'SS Sequence:
TGTCGCTTTCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAC

U12 Branch Point Sequence:
TTTGTTTTAACT

Flanking Amino Acid:
ELILELLAYLDRSPQFKNIE

Intron Amino Acid Position:
696

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.1
0.66
1
74.9
35.9

Major BPS
89.7
0.98
0.7
89.9
20

Major PPT
78.9
0.65
0.9
69.3
41.7

Minor 5ss
41.1
-1
3.1
59.5
44.9

Minor BPS
78.3
0.97
1.2
90.89
33.1

Associated Gene:

Gene:
DHX29

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

18419049 - 18443000
23952

18419049 - 18443000
23952