Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_18440374_18440787_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18440374 - 18440787

Intron Length:

414

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTGA

5'SS Class:

strong_major

3'SS Sequence:

GTTGCTCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

TTATGTTTAATT

Flanking Amino Acid:

KKKENGPETKETNTEKQKEV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

76.9

34.6

Major BPS

81.8

0.79

1.1

34.5

Major PPT

79.3

0.66

0.9

69.7

41.5

Minor 5ss

39.6

-1.2

2.8

50.5

45.7

Minor BPS

0.67

1.7

84.32

36.9

Associated Gene:

Gene:

DHX29

Ensembl Gene ID:

ENSAPLG00000009145

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022622

18419049 - 18443000

23952

ENSAPLT00000009583

18419049 - 18443000

23952