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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_18455976_18457747_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18455976 - 18457747

Intron Length:

1772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTCTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

AATTTCTTTACT

Flanking Amino Acid:

LSDEDKKLPQVEHVLPLLKR

Intron Amino Acid Position:

424

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.6

22.2

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

84.3

0.77

0.8

37.2

Minor 5ss

30.8

-2.2

3.2

39.9

46.1

Minor BPS

69.9

0.71

1.6

83.19

37.7

Associated Gene:

Gene:

MTREX

Ensembl Gene ID:

ENSAPLG00000009694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010209

18444165 - 18489941

45777