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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_18489375_18489700_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18489375 - 18489700

Intron Length:

326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TCTTGTTTTACA

Flanking Amino Acid:

NTELENKFAEGITKIKRDIV

Intron Amino Acid Position:

1009

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

81.8

38.5

Major BPS

75.9

0.64

66.1

40.5

Major PPT

88.7

0.87

0.7

83.2

31.9

Minor 5ss

39.8

-1.1

3.2

51.2

45.5

Minor BPS

0.15

2.1

70.62

41.9

Associated Gene:

Gene:

MTREX

Ensembl Gene ID:

ENSAPLG00000009694

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010209

18444165 - 18489941

45777