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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_18503741_18520622_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18503741 - 18520622

Intron Length:

16882

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

AAATAATGAAAT

Flanking Amino Acid:

QGEKAKINEGRLSFYSGHSS

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.5

0.98

0.7

80.9

25.7

Major BPS

71.2

0.53

70.3

31.9

Major PPT

91.7

0.94

0.6

84.6

30.3

Minor 5ss

27.5

-2.6

33.8

42.3

Minor BPS

45.1

-0.2

1.9

62.11

40.1

Associated Gene:

Gene:

PLPP1

Ensembl Gene ID:

ENSAPLG00000010771

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034041

18489774 - 18549452

59679

ENSAPLT00000023588

18489847 - 18534969

45123

ENSAPLT00000011239

18489774 - 18548940

59167

ENSAPLT00000039272

18489774 - 18548940

59167

ENSAPLT00000035474

18489847 - 18535296

45450