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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_18520904_18534814_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18520904 - 18534814

Intron Length:

13911

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

CTTTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAC

U12 Branch Point Sequence:

CTTCCTTTAACT

Flanking Amino Acid:

TVGFTLPIFSIILGETLSVF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

1.1

69.5

41.3

Major BPS

77.3

0.68

79.3

29.4

Major PPT

93.6

0.98

0.6

92.3

Minor 5ss

-1.2

2.8

55.8

41.5

Minor BPS

80.1

1.02

1.1

89.23

35.4

Associated Gene:

Gene:

PLPP1

Ensembl Gene ID:

ENSAPLG00000010771

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039272

18489774 - 18548940

59167

ENSAPLT00000035474

18489847 - 18535296

45450