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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_18523828_18548882_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18523828 - 18548882

Intron Length:

25055

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTCTG

5'SS Class:

major

3'SS Sequence:

TCCTTTTTGCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTTTTTATTC

Flanking Amino Acid:

VALDVVCVVLAGLPFAILNS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

63.6

48.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.3

0.59

0.9

72.5

37.7

Minor 5ss

-1.6

3.2

45.3

Minor BPS

62.3

0.36

1.5

70.52

35.3

Associated Gene:

Gene:

PLPP1

Ensembl Gene ID:

ENSAPLG00000010771

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011239

18489774 - 18548940

59167