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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_18534970_18548882_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18534970 - 18548882

Intron Length:

13913

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTCTG

5'SS Class:

major

3'SS Sequence:

CTTCCCCCAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

CTTCCCCCAACA

Flanking Amino Acid:

VALDVVCVVLAGLPLGVLNL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

63.6

48.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.8

0.49

0.8

66.3

28.4

Minor 5ss

-1.6

3.2

45.3

Minor BPS

53.7

0.11

1.9

70.3

41.4

Associated Gene:

Gene:

PLPP1

Ensembl Gene ID:

ENSAPLG00000010771

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039272

18489774 - 18548940

59167