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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_18576746_18583642_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18576746 - 18583642

Intron Length:

6897

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAGA

5'SS Class:

strong_major

3'SS Sequence:

CATTTCCCTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTCCTCATTT

Flanking Amino Acid:

LRQLFGNAYPSVFHVLILNI

Intron Amino Acid Position:

475

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

80.8

33.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.4

0.59

0.8

70.7

Minor 5ss

32.8

-2

2.9

40.7

45.1

Minor BPS

61.1

0.43

1.8

79.99

42.5

Associated Gene:

Gene:

SLC38A9

Ensembl Gene ID:

ENSAPLG00000010983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019727

18574765 - 18622137

47373

ENSAPLT00000018457

18574765 - 18622888

48124

ENSAPLT00000011477

18574765 - 18622137

47373

ENSAPLT00000042367

18574765 - 18602907

28143