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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_18594644_18596274_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18594644 - 18596274

Intron Length:

1631

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAGGTAAC

5'SS Class:

major

3'SS Sequence:

TACTCTTTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCATTAT

U12 Branch Point Sequence:

TGTTTGTTTACT

Flanking Amino Acid:

PSFFAKFNVLGTVSVIYLIL

Intron Amino Acid Position:

316

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

72.3

39.5

Major BPS

72.1

0.55

1.1

62.3

43.7

Major PPT

80.4

0.68

0.8

73.3

36.8

Minor 5ss

34.2

-1.8

36.5

40.9

Minor BPS

54.2

0.21

2.3

80.32

41.4

Associated Gene:

Gene:

SLC38A9

Ensembl Gene ID:

ENSAPLG00000010983

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025602

18579374 - 18622888

43515

ENSAPLT00000019727

18574765 - 18622137

47373

ENSAPLT00000018457

18574765 - 18622888

48124

ENSAPLT00000011477

18574765 - 18622137

47373

ENSAPLT00000042367

18574765 - 18602907

28143