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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_18638486_18640420_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18638486 - 18640420

Intron Length:

1935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGACT

5'SS Class:

strong_major

3'SS Sequence:

CTTTGCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

CTTTCCTCACTG

Flanking Amino Acid:

RGRGAIGGHSGDHDHENNMH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

78.5

35.4

Major BPS

65.7

0.39

71.3

30.3

Major PPT

87.1

0.84

0.7

84.4

30.5

Minor 5ss

34.3

-1.8

3.3

49.5

46.5

Minor BPS

53.9

-0

1.9

63.16

45.2

Associated Gene:

Gene:

DDX4

Ensembl Gene ID:

ENSAPLG00000011662

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012138

18630237 - 18659896

29660