Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_18736657_18737676_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18736657 - 18737676

Intron Length:

1020

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTATA

5'SS Class:

major

3'SS Sequence:

TAATCCTCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTTAATC

Flanking Amino Acid:

GVLFCFNKRDLIKKHIWPNV

Intron Amino Acid Position:

665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.2

0.69

81.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

76.8

0.6

0.9

70.4

35.6

Minor 5ss

41.9

-0.9

2.8

57.3

41.2

Minor BPS

74.9

0.76

1.1

77.11

33.4

Associated Gene:

Gene:

IL6ST

Ensembl Gene ID:

ENSAPLG00000011926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012487

18733733 - 18756949

23217