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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_18745770_18746820_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18745770 - 18746820

Intron Length:

1051

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTCGTGTC

5'SS Class:

major

3'SS Sequence:

TCTTTCATCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

TTTTCTTTCATC

Flanking Amino Acid:

VLLIPTSNSKAPVKNIRTLP

Intron Amino Acid Position:

444

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.2

71.9

38.2

Major BPS

89.7

0.98

0.7

89.9

Major PPT

81.4

0.71

0.8

73.8

35.4

Minor 5ss

32.5

-2

3.3

44.3

43.6

Minor BPS

70.8

0.64

1.7

81.67

33.1

Associated Gene:

Gene:

IL6ST

Ensembl Gene ID:

ENSAPLG00000011926

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012487

18733733 - 18756949

23217