Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_18831557_18833654_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

18831557 - 18833654

Intron Length:

2098

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTACCAAGT

5'SS Class:

major

3'SS Sequence:

ATTTCTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTCTTTTAAAA

Flanking Amino Acid:

RTSLSVATYLGWLEGCVSLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.2

0.26

1.2

59.3

45.3

Major BPS

90.4

0.7

90.2

19.3

Major PPT

90.7

0.92

0.7

27.2

Minor 5ss

39.8

-1.1

3.2

55.4

43.6

Minor BPS

69.4

0.6

1.3

77.65

32.3

Associated Gene:

Gene:

ANKRD55

Ensembl Gene ID:

ENSAPLG00000012756

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013274

18795492 - 18844202

48711