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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1885411_1885989_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1885411 - 1885989

Intron Length:

579

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CCTCCCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGAGAT

U12 Branch Point Sequence:

AGGGCTGAGATT

Flanking Amino Acid:

NVDVAVTMPREVFQDKDNLN

Intron Amino Acid Position:

201

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

68.8

43.8

Major BPS

51.7

0.04

1.3

50.1

44.2

Major PPT

79.3

0.66

0.7

72.6

25.5

Minor 5ss

31.9

-2.1

2.9

41.8

Minor BPS

37.6

-0.8

2.1

48.41

39.6

Associated Gene:

Gene:

NOL6

Ensembl Gene ID:

ENSAPLG00000003837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033229

1883525 - 1916266

32742

ENSAPLT00000003982

1883525 - 1912199

28675