Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1890633_1892369_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1890633 - 1892369

Intron Length:

1737

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGAGTTG

5'SS Class:

major

3'SS Sequence:

TGTGTGTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCAGAG

U12 Branch Point Sequence:

GGAGAGGCAACT

Flanking Amino Acid:

LDSVIKIGKEDSGTGEEAMV

Intron Amino Acid Position:

665

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.1

0.5

1.1

63.7

43.1

Major BPS

44.1

-0.3

1.5

40.4

42.3

Major PPT

0.5

65.5

Minor 5ss

38.3

-1.3

3.7

54.5

49.7

Minor BPS

32.4

-1.2

2.5

47.66

44.1

Associated Gene:

Gene:

NOL6

Ensembl Gene ID:

ENSAPLG00000003837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033229

1883525 - 1916266

32742

ENSAPLT00000003982

1883525 - 1912199

28675