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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1897350_1902423_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1897350 - 1902423

Intron Length:

5074

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCCTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTCCAT

U12 Branch Point Sequence:

TTTTCTTCCATG

Flanking Amino Acid:

MDPLGSQDVKIAFRPPLDLY

Intron Amino Acid Position:

1013

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

74.6

41.7

Major BPS

0.37

1.3

76.1

Major PPT

82.3

0.73

0.8

77.8

29.8

Minor 5ss

43.9

-0.7

3.2

65.5

45.6

Minor BPS

52.6

-0

67.06

41.5

Associated Gene:

Gene:

NOL6

Ensembl Gene ID:

ENSAPLG00000003837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003982

1883525 - 1912199

28675

ENSAPLT00000033229

1883525 - 1916266

32742