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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_19039941_19041852_R

Intron Information:

Intron Rank:
136523
Intron Class:
major
Intron Phase:
Intron Coordinates:
19039941 - 19041852
Intron Length:
1912

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ATT|GTAAGTGCT
5'SS Class:
major
3'SS Sequence:
ATGTTTCAAACAG|T
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TATTTAT
U12 Branch Point Sequence:
TTCTCTATATAT
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
76.7
0.63
1
73.6
35.1
Major BPS
88.7
0.96
0.8
78
36.5
Major PPT
67.8
0.4
1.1
63.6
41.5
Minor 5ss
37.9
-1.4
3.3
56.6
41.9
Minor BPS
49.7
0.06
2
73.89
42.9

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000020887
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000023397
19039817 - 19042851
3035