Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_19042022_19042830_R

Intron Information:

Intron Rank:

136524

Intron Class:

major

Intron Phase:

Intron Coordinates:

19042022 - 19042830

Intron Length:

809

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCATCTC

5'SS Class:

major

3'SS Sequence:

TTTTCCTGAATAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATTAT

U12 Branch Point Sequence:

TTTTCCTGAATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.3

0.53

65.7

40.2

Major BPS

84.7

0.86

74.3

40.7

Major PPT

72.5

0.51

0.9

70.3

35.1

Minor 5ss

31.6

-2.1

3.3

43.8

43.9

Minor BPS

81.5

0.99

1.2

88.53

28.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020887

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035786

19041839 - 19042851

1013

ENSAPLT00000023397

19039817 - 19042851

3035