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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1910793_1912049_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1910793 - 1912049

Intron Length:

1257

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTACAA

U12 Branch Point Sequence:

ATTTGTACAATG

Flanking Amino Acid:

PLSFQPQPFKVSNMKGRMVS

Intron Amino Acid Position:

1113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.9

1.06

0.6

14.8

Major BPS

58.4

0.21

1.2

39.8

Major PPT

0.67

0.9

36.8

Minor 5ss

40.7

-1

57.8

46.8

Minor BPS

43.9

-0.6

2.1

54.67

Associated Gene:

Gene:

NOL6

Ensembl Gene ID:

ENSAPLG00000003837

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033229

1883525 - 1916266

32742

ENSAPLT00000003982

1883525 - 1912199

28675