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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_19124093_19126676_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

19124093 - 19126676

Intron Length:

2584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TAATTCCTGCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TAATTTGTAATT

Flanking Amino Acid:

LERRSRRGPVVVKPIPVKGD

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

77.9

36.8

Major BPS

84.4

0.85

1.1

34.5

Major PPT

58.2

0.19

1.2

57.4

Minor 5ss

36.2

-1.6

2.7

42.7

38.4

Minor BPS

54.2

0.21

73.01

38.5

Associated Gene:

Gene:

MAP3K1

Ensembl Gene ID:

ENSAPLG00000009424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040090

19089280 - 19147477

58198

ENSAPLT00000009828

19089280 - 19146271

56992