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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_19141348_19142000_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

19141348 - 19142000

Intron Length:

653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATATT

5'SS Class:

strong_major

3'SS Sequence:

TATTTCAAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAA

U12 Branch Point Sequence:

TATTTCAAAACA

Flanking Amino Acid:

GTGTLMAVKQVTYVRNTSSE

Intron Amino Acid Position:

1287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

93.3

21.1

Major BPS

0.79

0.8

83.7

25.7

Major PPT

68.7

0.42

64.3

40.3

Minor 5ss

-1

59.7

44.8

Minor BPS

56.5

0.2

1.9

73.15

38.5

Associated Gene:

Gene:

MAP3K1

Ensembl Gene ID:

ENSAPLG00000009424

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040090

19089280 - 19147477

58198

ENSAPLT00000009828

19089280 - 19146271

56992