Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_19434660_19455544_F

Intron Information:

Intron Rank:

140319

Intron Class:

major

Intron Phase:

Intron Coordinates:

19434660 - 19455544

Intron Length:

20885

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TATTCTTTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TATTCTTTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.8

81.1

26.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

79.5

0.66

76.3

37.4

Minor 5ss

29.7

-2.3

2.6

30.1

36.9

Minor BPS

80.4

0.95

83.24

30.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029259

19434450 - 19458487

24038

ENSAPLT00000018400

19434450 - 19455909

21460