Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_19455732_19458460_F

Intron Information:

Intron Rank:

140322

Intron Class:

major

Intron Phase:

Intron Coordinates:

19455732 - 19458460

Intron Length:

2729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTGTA

5'SS Class:

major

3'SS Sequence:

GCAATTTCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

GAGATCTCAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

74.8

35.3

Major BPS

87.3

0.93

0.8

36.5

Major PPT

72.4

0.5

65.6

40.7

Minor 5ss

39.2

-1.2

3.4

45.5

Minor BPS

51.2

0.02

1.6

57.37

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025496

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029259

19434450 - 19458487

24038