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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_19502395_19507711_F

Intron Information:

Intron Rank:

129816

Intron Class:

major

Intron Phase:

Intron Coordinates:

19502395 - 19507711

Intron Length:

5317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

ATTTTTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAT

U12 Branch Point Sequence:

ATATACTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.1

78.6

35.6

Major BPS

83.6

0.84

0.8

71.9

35.8

Major PPT

89.5

0.89

0.7

81.7

35.4

Minor 5ss

41.5

-0.9

3.5

68.1

42.7

Minor BPS

59.4

0.37

1.8

76.51

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034292

19502355 - 19513517

11163

ENSAPLT00000039849

19501780 - 19508769

6990