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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_1952551_1960794_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1952551 - 1960794

Intron Length:

8244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAA

U12 Branch Point Sequence:

TTTTTTTTTCCT

Flanking Amino Acid:

AECLGTLILVLFGCGSVAQI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

70.5

41.3

Major BPS

69.4

0.48

71.6

33.8

Major PPT

92.5

0.96

0.6

85.6

29.1

Minor 5ss

32.5

-2

38.1

40.9

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

AQP3

Ensembl Gene ID:

ENSAPLG00000004227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004620

1952443 - 1964601

12159