Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_19528503_19535435_F

Intron Information:

Intron Rank:

125323

Intron Class:

major

Intron Phase:

Intron Coordinates:

19528503 - 19535435

Intron Length:

6933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATCTGA

5'SS Class:

major

3'SS Sequence:

CTCCTTTTCTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

CTAGTCTTAACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

67.8

40.1

Major BPS

77.1

0.67

77.9

32.2

Major PPT

0.67

0.7

79.7

25.7

Minor 5ss

43.3

-0.7

2.9

56.8

47.3

Minor BPS

68.2

0.57

1.4

71.36

41.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017486

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042178

19527457 - 19536510

9054